Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | PS417_RS22035 | Not Available | Positive | 1291305 - 1291688 | 13628.5 |
| Phage tail x | PS417_RS22030 | Not Available | Positive | 1291681 - 1291893 | 7714.15 |
| Tail protein | PS417_RS22025 | Not Available | Positive | 1291903 - 1292910 | 36740.8 |
| Lysozyme | PS417_RS22020 | Not Available | Positive | 1292917 - 1293474 | 20534.7 |
| Rz | PS417_RS27765 | Not Available | Positive | 1293462 - 1293932 | 16934.4 |
| cina family protein | PS417_RS22015 | Not Available | Positive | 1294014 - 1294514 | 17684.0 |
| Dna strand exchange and recombination protein with protease and nuclease activity | PS417_RS22010 | Not Available | Positive | 1294599 - 1295657 | 37582.4 |
| recombination regulator recx | PS417_RS22005 | Not Available | Positive | 1295666 - 1296133 | 17958.6 |
| Hypothetical protein | PS417_RS22000 | Not Available | Negative | 1296197 - 1297309 | 41722.8 |
| pa3611 family quorum-sensing-regulated virulence factor | PS417_RS21995 | Not Available | Negative | 1297586 - 1298026 | 16101.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
