Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3077 domain-containing protein | PS417_RS26825 | Not Available | Negative | 194666 - 194938 | 9864.67 |
| hypothetical protein | PS417_RS26820 | Not Available | Negative | 194935 - 195219 | 9851.78 |
| hypothetical protein | PS417_RS26815 | Not Available | Negative | 195747 - 196052 | 11756.3 |
| helix-turn-helix transcriptional regulator | PS417_RS28365 | Not Available | Negative | 196049 - 196303 | 9155.95 |
| helix-turn-helix domain-containing protein | PS417_RS28370 | Not Available | Negative | 196402 - 196686 | 10086.0 |
| pyocin activator prtn family protein | PS417_RS27690 | Not Available | Negative | 196831 - 197124 | 11122.4 |
| tyrosine-type recombinase/integrase | PS417_RS26810 | Not Available | Negative | 197380 - 198615 | 46936.5 |
| Trna-arg | Not Available | Not Available | Positive | 198783 - 198859 | Not Available |
| nadp-dependent succinate-semialdehyde dehydrogenase | PS417_RS26800 | Not Available | Positive | 199231 - 200673 | 51628.4 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PS417_RS26795 | Not Available | Positive | 200854 - 202131 | 44853.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
