Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | PS417_RS26880 | Not Available | Positive | 179799 - 180371 | 21693.5 |
| hypothetical protein | PS417_RS26875 | Not Available | Positive | 180368 - 180961 | 21353.7 |
| hypothetical protein | PS417_RS26870 | Not Available | Negative | 181253 - 181504 | 9302.9 |
| aaa family atpase | PS417_RS26865 | Not Available | Positive | 182395 - 183564 | 43822.0 |
| hnh endonuclease | PS417_RS26860 | Not Available | Positive | 183570 - 184313 | 28150.4 |
| putative phage abortive infection protein | PS417_RS26855 | Not Available | Negative | 184797 - 185834 | 39461.3 |
| hypothetical protein | PS417_RS26850 | Not Available | Positive | 186254 - 190063 | 142313.0 |
| histone-like nucleoid-structuring protein, mvat/mvau family | PS417_RS26845 | Not Available | Negative | 190140 - 190505 | 13871.9 |
| hypothetical protein | PS417_RS26835 | Not Available | Negative | 190726 - 191670 | 36154.1 |
| duf927 domain-containing protein | PS417_RS26830 | Not Available | Negative | 191763 - 194669 | 104700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
