Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb/fhac/hecb family hemolysin secretion/activation protein | PS417_RS26930 | Not Available | Positive | 161475 - 163196 | 64208.6 |
| filamentous hemagglutinin n-terminal domain-containing protein | PS417_RS26925 | Not Available | Positive | 163228 - 170496 | 250520.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | PS417_RS26920 | Not Available | Positive | 171401 - 173989 | 88673.3 |
| hypothetical protein | PS417_RS26915 | Not Available | Negative | 174053 - 174640 | 21349.6 |
| hypothetical protein | PS417_RS26910 | Not Available | Negative | 174656 - 175267 | 21725.0 |
| hypothetical protein | PS417_RS26905 | Not Available | Positive | 175540 - 176121 | 21572.0 |
| csgg/hfab family protein | PS417_RS26900 | Not Available | Positive | 176162 - 176842 | 24054.8 |
| duf4810 domain-containing protein | PS417_RS26895 | Not Available | Positive | 176884 - 177246 | 13404.2 |
| duf799 domain-containing protein | PS417_RS26890 | Not Available | Positive | 177243 - 177893 | 22617.1 |
| vwa domain-containing protein | PS417_RS26885 | Not Available | Positive | 178006 - 179646 | 59352.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
