Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | PS417_RS26980 | Not Available | Positive | 147520 - 149598 | 77052.5 |
| duf1656 domain-containing protein | PS417_RS26975 | Not Available | Positive | 149595 - 149804 | 7823.01 |
| efflux rnd transporter periplasmic adaptor subunit | PS417_RS26970 | Not Available | Positive | 149801 - 150691 | 32855.4 |
| efflux transporter outer membrane subunit | PS417_RS26965 | Not Available | Positive | 150688 - 152130 | 50985.3 |
| hypothetical protein | PS417_RS26960 | Not Available | Positive | 152212 - 152844 | 24229.2 |
| ydga family protein | PS417_RS26955 | Not Available | Positive | 152992 - 154488 | 53241.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | PS417_RS26950 | Not Available | Positive | 154789 - 157269 | 92120.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | PS417_RS26945 | Not Available | Positive | 157282 - 159279 | 74191.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | PS417_RS26940 | Not Available | Positive | 159282 - 160622 | 50931.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | PS417_RS26935 | Not Available | Positive | 160625 - 161107 | 18074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
