Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | PS417_RS27030 | Not Available | Positive | 135246 - 136304 | 37440.8 |
| efflux transporter outer membrane subunit | PS417_RS27025 | Not Available | Positive | 136301 - 137746 | 53100.5 |
| sigma-70 family rna polymerase sigma factor | PS417_RS27020 | Not Available | Positive | 137821 - 138330 | 19588.4 |
| fecr domain-containing protein | PS417_RS27015 | Not Available | Positive | 138327 - 139277 | 34998.9 |
| tonb-dependent siderophore receptor | PS417_RS27010 | Not Available | Positive | 139370 - 141823 | 89267.8 |
| duf3142 domain-containing protein | PS417_RS27005 | Not Available | Negative | 141954 - 142658 | 26655.1 |
| hypothetical protein | PS417_RS27000 | Not Available | Negative | 142655 - 144823 | 79257.5 |
| glycosyltransferase family 39 protein | PS417_RS26995 | Not Available | Positive | 144992 - 146596 | 60464.7 |
| duf2789 domain-containing protein | PS417_RS26990 | Not Available | Positive | 146630 - 146875 | 9092.86 |
| marr family winged helix-turn-helix transcriptional regulator | PS417_RS26985 | Not Available | Positive | 147113 - 147523 | 14967.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
