Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diiron oxygenase | PS417_RS27080 | Not Available | Negative | 125137 - 126084 | 35331.6 |
| duf3050 domain-containing protein | PS417_RS27075 | Not Available | Negative | 126081 - 126839 | 28209.9 |
| gntr family transcriptional regulator | PS417_RS27070 | Not Available | Negative | 127170 - 127880 | 26539.3 |
| taud/tfda dioxygenase family protein | PS417_RS27065 | Not Available | Positive | 128247 - 129140 | 33443.6 |
| abc transporter substrate-binding protein | PS417_RS27060 | Not Available | Positive | 129155 - 130180 | 37079.1 |
| abc transporter atp-binding protein | PS417_RS27055 | Not Available | Positive | 130182 - 131033 | 31707.5 |
| abc transporter permease | PS417_RS27050 | Not Available | Positive | 131045 - 131893 | 31462.4 |
| energy transducer tonb | PS417_RS27045 | Not Available | Positive | 131993 - 132619 | 23066.7 |
| lysr family transcriptional regulator | PS417_RS27040 | Not Available | Positive | 132672 - 133592 | 33963.3 |
| mfs transporter | PS417_RS27035 | Not Available | Positive | 133695 - 135230 | 55155.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
