Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PS417_RS27130 | Not Available | Negative | 111730 - 113166 | 49910.0 |
| nad(p) transhydrogenase subunit alpha | PS417_RS27125 | Not Available | Negative | 113166 - 113486 | 11338.5 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | PS417_RS27120 | Not Available | Negative | 113502 - 114623 | 38852.2 |
| lysr family transcriptional regulator | PS417_RS27115 | Not Available | Negative | 115076 - 115975 | 33973.6 |
| acyl-coa dehydrogenase | PS417_RS27110 | Not Available | Positive | 116133 - 117314 | 43162.9 |
| caib/baif coa transferase family protein | PS417_RS27105 | Not Available | Positive | 117327 - 118547 | 43183.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 118960 - 119075 | Not Available |
| methyl-accepting chemotaxis protein | PS417_RS27095 | Not Available | Positive | 119360 - 121240 | 67086.9 |
| srpbcc family protein | PS417_RS27090 | Not Available | Negative | 121286 - 121744 | 16798.1 |
| amino acid adenylation domain-containing protein | PS417_RS27085 | Not Available | Negative | 121763 - 125140 | 124050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
