Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | PS417_RS27180 | Not Available | Negative | 101534 - 103192 | 59894.5 |
| terc family protein | PS417_RS27175 | Not Available | Negative | 103404 - 104171 | 28267.6 |
| citmhs family transporter | PS417_RS27170 | Not Available | Negative | 104240 - 105547 | 46547.3 |
| duf4105 domain-containing protein | PS417_RS27165 | Not Available | Negative | 105924 - 107885 | 73346.2 |
| duf2388 domain-containing protein | PS417_RS27160 | Not Available | Negative | 107882 - 108202 | 11211.2 |
| duf2388 domain-containing protein | PS417_RS27155 | Not Available | Negative | 108229 - 108537 | 11126.3 |
| duf2388 domain-containing protein | PS417_RS27150 | Not Available | Negative | 108618 - 108938 | 10858.9 |
| duf1127 domain-containing protein | PS417_RS27145 | Not Available | Negative | 109075 - 109260 | 7283.77 |
| duf1127 domain-containing protein | PS417_RS27140 | Not Available | Negative | 109524 - 109739 | 8348.03 |
| acetyl-coa hydrolase/transferase family protein | PS417_RS27135 | Not Available | Negative | 110057 - 111550 | 53704.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
