Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | PS417_RS27330 | Not Available | Negative | 69194 - 70201 | 36619.2 |
| catalase hpii | PS417_RS27325 | Not Available | Positive | 70395 - 72608 | 81227.5 |
| pa5502 family lipoprotein | PS417_RS27320 | Not Available | Negative | 72707 - 73426 | 25713.8 |
| zinc abc transporter permease subunit znub | PS417_RS27315 | Not Available | Negative | 73464 - 74252 | 27380.0 |
| zinc abc transporter atp-binding protein znuc | PS417_RS27310 | Not Available | Negative | 74245 - 75030 | 28207.2 |
| fur family transcriptional regulator | PS417_RS27305 | Not Available | Negative | 75030 - 75524 | 17898.5 |
| zinc abc transporter substrate-binding protein znua | PS417_RS27300 | Not Available | Positive | 75571 - 76500 | 33526.1 |
| homoserine kinase | PS417_RS27295 | Not Available | Negative | 76603 - 77556 | 35084.3 |
| duf2782 domain-containing protein | PS417_RS27290 | Not Available | Negative | 77613 - 77903 | 10732.0 |
| dna polymerase i | PS417_RS27285 | Not Available | Positive | 77978 - 80755 | 101358.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
