Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | PS417_RS27430 | Not Available | Positive | 49936 - 50688 | 27298.3 |
| gmc family oxidoreductase | PS417_RS27425 | Not Available | Positive | 50691 - 52475 | 65271.3 |
| cytochrome c | PS417_RS27420 | Not Available | Positive | 52488 - 53750 | 45013.1 |
| hypothetical protein | PS417_RS27415 | Not Available | Negative | 53828 - 54085 | 9679.94 |
| pa0069 family radical sam protein | PS417_RS27410 | Not Available | Positive | 54309 - 55367 | 39443.9 |
| carbonic anhydrase | PS417_RS27405 | Not Available | Positive | 55595 - 56326 | 26387.4 |
| sulp family inorganic anion transporter | PS417_RS27400 | Not Available | Positive | 56412 - 57959 | 53903.8 |
| hypothetical protein | PS417_RS27395 | Not Available | Negative | 58091 - 58738 | 23825.2 |
| cytochrome c oxidase subunit ii | PS417_RS27390 | Not Available | Positive | 59106 - 60233 | 41696.5 |
| cytochrome c oxidase subunit i | PS417_RS27385 | Not Available | Positive | 60292 - 61878 | 58529.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
