Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | PS417_RS27480 | Not Available | Negative | 42057 - 43058 | 36285.7 |
| osmc family protein | PS417_RS27475 | Not Available | Positive | 43276 - 43707 | 14879.8 |
| duf1161 domain-containing protein | PS417_RS27470 | Not Available | Positive | 43943 - 44182 | 8555.27 |
| hypothetical protein | PS417_RS27465 | Not Available | Negative | 44183 - 44605 | 15654.0 |
| aminopeptidase | PS417_RS27460 | Not Available | Positive | 44748 - 45791 | 39518.0 |
| had family hydrolase | PS417_RS27455 | Not Available | Negative | 45878 - 46537 | 24872.5 |
| gamma carbonic anhydrase family protein | PS417_RS27450 | Not Available | Negative | 46534 - 47076 | 19269.4 |
| oligopeptidase a | PS417_RS27445 | Not Available | Positive | 47131 - 49230 | 77150.0 |
| yhev family putative zinc ribbon protein | PS417_RS27440 | Not Available | Positive | 49227 - 49502 | 9901.89 |
| dna helicase ii | PS417_RS27435 | Not Available | Negative | 49538 - 49705 | 6004.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
