Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | PS417_RS27580 | Not Available | Positive | 23683 - 24240 | 20728.9 |
| quinone oxidoreductase family protein | PS417_RS27575 | Not Available | Negative | 24371 - 25348 | 34176.9 |
| oxygen-dependent coproporphyrinogen oxidase | PS417_RS27570 | Not Available | Positive | 25508 - 26440 | 35252.1 |
| shikimate dehydrogenase | PS417_RS27565 | Not Available | Positive | 26440 - 27258 | 29231.9 |
| sulp family inorganic anion transporter | PS417_RS27560 | Not Available | Negative | 27295 - 28887 | 57225.9 |
| choline abc transporter substrate-binding protein | PS417_RS27555 | Not Available | Negative | 29021 - 29935 | 33066.8 |
| choline-sulfatase | PS417_RS27550 | Not Available | Negative | 29951 - 31465 | 56966.6 |
| choline sulfate utilization transcriptional regulator | PS417_RS27545 | Not Available | Positive | 31569 - 32519 | 35651.6 |
| dopa 4,5-dioxygenase family protein | PS417_RS27540 | Not Available | Positive | 32551 - 32880 | 12490.0 |
| 2-dehydro-3-deoxygalactonokinase | PS417_RS27535 | Not Available | Positive | 32977 - 33936 | 33842.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
