Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | PS417_RS27625 | Not Available | Negative | 14341 - 15294 | 36220.9 |
| dna-3-methyladenine glycosylase i | PS417_RS27620 | Not Available | Positive | 15376 - 15933 | 20889.2 |
| lysophospholipid acyltransferase | PS417_RS27615 | Not Available | Positive | 15974 - 16861 | 32645.9 |
| hypothetical protein | PS417_RS27610 | Not Available | Negative | 16998 - 17309 | 11308.6 |
| trk system potassium transporter trka | PS417_RS27605 | Not Available | Negative | 17327 - 18700 | 49761.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | PS417_RS27600 | Not Available | Negative | 18722 - 20032 | 47220.9 |
| methionyl-trna formyltransferase | PS417_RS27595 | Not Available | Negative | 20029 - 20982 | 33645.9 |
| peptide deformylase | PS417_RS27590 | Not Available | Negative | 21052 - 21558 | 19326.4 |
| hypothetical protein | PS417_RS27585 | Not Available | Positive | 21694 - 22470 | 28276.2 |
| dna-processing protein dpra | PS417_RS27680 | Not Available | Positive | 22534 - 23628 | 38708.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
