Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PS417_RS17770 | Not Available | Positive | 2185927 - 2186181 | 9352.84 |
| Glycoside hydrolase family 19 protein | PS417_RS17765 | Not Available | Positive | 2186238 - 2186771 | 19327.2 |
| Hypothetical protein | PS417_RS27855 | Not Available | Positive | 2186768 - 2187265 | 17391.5 |
| hypothetical protein | PS417_RS29050 | Not Available | Negative | 2187532 - 2188014 | 18255.7 |
| duf3617 domain-containing protein | PS417_RS17760 | Not Available | Negative | 2188359 - 2188838 | 17676.9 |
| lysis protein | PS417_RS29410 | Not Available | Positive | 2188979 - 2189092 | 3954.82 |
| Hypothetical protein | PS417_RS17755 | Not Available | Negative | 2189079 - 2189765 | 25420.2 |
| hypothetical protein | PS417_RS17750 | Not Available | Negative | 2189794 - 2190156 | 13530.1 |
| Phage integrase family site-specific recombinase | PS417_RS17745 | Not Available | Negative | 2190375 - 2191559 | 44034.8 |
| Attr | Not Available | Not Available | Positive | 2195058 - 2195074 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
