Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipid ii flippase ftsw | PS417_RS23155 | Not Available | Positive | 1026493 - 1027716 | 44534.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | PS417_RS23150 | Not Available | Positive | 1027706 - 1028776 | 37679.1 |
| udp-n-acetylmuramate--l-alanine ligase | PS417_RS23145 | Not Available | Positive | 1028769 - 1030214 | 52209.0 |
| d-alanine--d-alanine ligase | PS417_RS23140 | Not Available | Positive | 1030211 - 1031167 | 33904.4 |
| cell division protein ftsq/divib | PS417_RS23135 | Not Available | Positive | 1031172 - 1032041 | 32391.3 |
| cell division protein ftsa | PS417_RS23130 | Not Available | Positive | 1032057 - 1033319 | 44924.1 |
| cell division protein ftsz | PS417_RS23125 | Not Available | Positive | 1033394 - 1034590 | 41736.3 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | PS417_RS23120 | Not Available | Positive | 1034703 - 1035614 | 33219.6 |
| sensor domain-containing diguanylate cyclase | PS417_RS23115 | Not Available | Negative | 1035692 - 1037191 | 55160.5 |
| oprd family porin | PS417_RS23110 | Not Available | Negative | 1037277 - 1038599 | 48267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
