Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | PS417_RS23200 | Not Available | Positive | 1016094 - 1016999 | 32527.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1017096 - 1017449 | Not Available |
| division/cell wall cluster transcriptional repressor mraz | PS417_RS23195 | Not Available | Positive | 1017804 - 1018259 | 17062.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PS417_RS23190 | Not Available | Positive | 1018262 - 1019203 | 34163.1 |
| cell division protein ftsl | PS417_RS23185 | Not Available | Positive | 1019200 - 1019493 | 10787.3 |
| peptidoglycan d,d-transpeptidase ftsi family protein | PS417_RS23180 | Not Available | Positive | 1019493 - 1021235 | 63086.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PS417_RS23175 | Not Available | Positive | 1021235 - 1022698 | 51999.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PS417_RS23170 | Not Available | Positive | 1022691 - 1024061 | 47435.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PS417_RS23165 | Not Available | Positive | 1024061 - 1025143 | 39301.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | PS417_RS23160 | Not Available | Positive | 1025150 - 1026496 | 47675.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
