Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | PS417_RS23350 | Not Available | Negative | 985798 - 986436 | 23009.3 |
| hypoxanthine-guanine phosphoribosyltransferase | PS417_RS23345 | Not Available | Positive | 986601 - 987158 | 20852.1 |
| wbuc family cupin fold metalloprotein | PS417_RS23340 | Not Available | Positive | 987162 - 987629 | 17082.4 |
| hypothetical protein | PS417_RS23335 | Not Available | Positive | 987665 - 988150 | 17775.6 |
| pa4642 family protein | PS417_RS23330 | Not Available | Positive | 988342 - 988629 | 10914.9 |
| malate dehydrogenase (quinone) | PS417_RS23325 | Not Available | Negative | 988699 - 990207 | 54533.4 |
| hypothetical protein | PS417_RS23320 | Not Available | Negative | 990926 - 991159 | 8868.76 |
| yajg family lipoprotein | PS417_RS23315 | Not Available | Positive | 991354 - 991941 | 20580.7 |
| hypothetical protein | PS417_RS23310 | Not Available | Negative | 991999 - 992208 | 7701.06 |
| hypothetical protein | PS417_RS23305 | Not Available | Positive | 992391 - 992648 | 9363.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
