Tenacibaculum litoreum str. HSC 22

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum litoreum strain HSC 22 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism has an optimal growth temperature of 37.0°C, suggesting it may thrive in environments that approximate warm, temperate conditions. As a member of the Tenacibaculum genus, T. litoreum is likely adapted to marine environments, which is consistent with the ecological niches typically associated with this group of bacteria. While specific ecological roles for strain HSC 22 are not delineated, members of the Tenacibaculum genus are often associated with aquatic ecosystems, where they can play crucial roles in nutrient cycling and interactions with other microbial communities. The aerobic nature of T. litoreum indicates that it requires oxygen for its metabolic processes, which may influence its distribution in oxygen-rich environments, such as the surface layers of marine sediments or water columns. Understanding the traits of T. litoreum str. HSC 22 can provide insights into its potential ecological functions and adaptations within its habitat, particularly regarding its interactions with other marine microorganisms and its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum singaporense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum singaporense strain HSC 22 scaffold23_size200, whole

Gene Summary

Adenine Count

1149201 bp

Thymine Count

1149580 bp

Guanine Count

538703 bp

Cytosine Count

539393 bp

Genome Length

3378527 bp

Protein-coding Genes

3011 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1801 domain-containing proteinEI424_00140Not AvailablePositive34716 - 3517418008.8
voc family proteinEI424_00145Not AvailablePositive35176 - 3556815405.1
tm2 domain-containing proteinEI424_00150Not AvailablePositive35604 - 3588510166.5
hypothetical proteinEI424_00155Not AvailablePositive35961 - 3627211491.2
cupin-like domain-containing proteinEI424_00160Not AvailableNegative36305 - 3717734589.9
hypothetical proteinEI424_00165Not AvailableNegative37273 - 3980195584.4
fecr family proteinEI424_00170Not AvailableNegative39791 - 4070234903.7
sigma-70 family rna polymerase sigma factorEI424_00175Not AvailableNegative40753 - 4126219963.9
hypothetical proteinEI424_00180Not AvailablePositive41391 - 4244338948.0
membrane metalloproteaseEI424_00185Not AvailablePositive42561 - 4333428807.6

Displaying genes 31 – 40 of 3070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.