Tenacibaculum litoreum str. HSC 22

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum litoreum strain HSC 22 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism has an optimal growth temperature of 37.0°C, suggesting it may thrive in environments that approximate warm, temperate conditions. As a member of the Tenacibaculum genus, T. litoreum is likely adapted to marine environments, which is consistent with the ecological niches typically associated with this group of bacteria. While specific ecological roles for strain HSC 22 are not delineated, members of the Tenacibaculum genus are often associated with aquatic ecosystems, where they can play crucial roles in nutrient cycling and interactions with other microbial communities. The aerobic nature of T. litoreum indicates that it requires oxygen for its metabolic processes, which may influence its distribution in oxygen-rich environments, such as the surface layers of marine sediments or water columns. Understanding the traits of T. litoreum str. HSC 22 can provide insights into its potential ecological functions and adaptations within its habitat, particularly regarding its interactions with other marine microorganisms and its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum singaporense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum singaporense strain HSC 22 scaffold23_size200, whole

Gene Summary

Adenine Count

1149201 bp

Thymine Count

1149580 bp

Guanine Count

538703 bp

Cytosine Count

539393 bp

Genome Length

3378527 bp

Protein-coding Genes

3011 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive111 - 1640Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2185 - 5058Not Available
universal stress proteinEI424_00005Not AvailableNegative1717 - 254431373.1
ribosome assembly cofactor rimpEI424_00010Not AvailablePositive2703 - 316417711.2
transcription termination/antitermination protein nusaEI424_00015Not AvailablePositive3177 - 443347379.2
translation initiation factor if-2EI424_00020Not AvailablePositive4568 - 7426105459.0
5s ribosomal rnaNot AvailableNot AvailablePositive5158 - 5266Not Available
zinc metalloproteaseEI424_00025Not AvailablePositive7787 - 875835585.9
hypothetical proteinEI424_00030Not AvailablePositive8847 - 927216141.7
hypothetical proteinEI424_00035Not AvailableNegative9322 - 1043740644.2

Displaying genes 1 – 10 of 3070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.