Dehalococcoides mccartyi VS

Gram-negativeCocciMotileAnaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Dehalococcoidia

Order

Dehalococcoidales

Family

Dehalococcoidaceae

Genus

Dehalococcoides

Description

Dehalococcoides mccartyi VS is a Gram-negative, nonsporulating cocci that thrives in anaerobic aquatic environments, with an optimal growth temperature of 35.0°C. As a chemolithotroph, this microbe utilizes inorganic compounds as its primary energy source, which positions it uniquely in biogeochemical cycles, particularly in the context of bioremediation processes where halogenated compounds are present. This organism typically exists as single cells, suggesting a potential adaptation to its habitat that allows for efficient nutrient acquisition in low-competition environments. The anaerobic requirement of D. mccartyi VS further emphasizes its role in anaerobic degradation pathways, particularly in the reductive dehalogenation of pollutants, which is critical for detoxifying environments contaminated with chlorinated solvents. Understanding the specific metabolic capabilities of D. mccartyi VS contributes to broader insights into microbial ecology and bioremediation strategies, highlighting the importance of anaerobic microorganisms in mitigating environmental pollution. The unique traits of this strain underscore its potential utility in biotechnological applications aimed at restoring contaminated aquatic ecosystems.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassDehalococcoidia
OrderDehalococcoidales
FamilyDehalococcoidaceae
GenusDehalococcoides
SpeciesDehalococcoides mccartyi
StrainVS

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Dehalococcoides mccartyi VS
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy source Chemolithotroph
PathogenicityNot Available

Genome Summary

Dehalococcoides mccartyi VS, complete sequence.

Gene Summary

Adenine Count

373615 bp

Thymine Count

371684 bp

Guanine Count

334201 bp

Cytosine Count

333962 bp

Genome Length

1413462 bp

Protein-coding Genes

1453 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate phosphoribosyltransferaseDHCVS_RS05840Not AvailablePositive1113158 - 111415935893.4
hgcab-associated protein hgccDHCVS_RS05845Not AvailablePositive1114279 - 11145278809.83
arsenite methyltransferaseDHCVS_RS05850Not AvailablePositive1114531 - 111536429207.6
trna lysidine(34) synthetase tilsDHCVS_RS05855Not AvailableNegative1115361 - 111679153269.9
histidine phosphatase family proteinDHCVS_RS05860Not AvailableNegative1116835 - 111745823109.8
m48 family metallopeptidaseDHCVS_RS05865Not AvailableNegative1117461 - 111863943746.8
tigr03936 family radical sam-associated proteinDHCVS_RS05870Not AvailableNegative1118639 - 111928324551.8
hlyc/corc family transporterDHCVS_RS05875Not AvailableNegative1119264 - 112053846948.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadDHCVS_RS05880Not AvailablePositive1120658 - 112163834194.1
co-chaperone groesDHCVS_RS05885Not AvailablePositive1122130 - 112242610677.3

Displaying genes 1181 – 1190 of 1505 in total

Metabolites

117 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001808corynebactinC39H42N6O18Chemical structure of corynebactinNot available
Average882.789Da
Monoisotopic882.2555585Da
BASm0001861(2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolC12H12O2Chemical structure of (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolNot available
Average188.226Da
Monoisotopic188.0837296Da

Displaying 1–10 of 117 metabolites

Health Effects

No health effects information available for this bacterium.