Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lower digestive tract |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWY20_04955 | Not Available | Positive | 1211516 - 1213927 | 90033.1 |
| duf4980 domain-containing protein | DWY20_04960 | Not Available | Positive | 1214111 - 1215988 | 70948.9 |
| alpha-galactosidase | DWY20_04965 | Not Available | Positive | 1216108 - 1218297 | 83156.0 |
| mfs transporter | DWY20_04970 | Not Available | Positive | 1218330 - 1219493 | 41772.7 |
| carbohydrate kinase | DWY20_04975 | Not Available | Positive | 1219523 - 1220413 | 32321.0 |
| response regulator | DWY20_04980 | Not Available | Positive | 1220509 - 1223247 | 102828.0 |
| iron-sulfur cluster repair di-iron protein | DWY20_04985 | Not Available | Positive | 1223500 - 1224228 | 28041.9 |
| duf3256 family protein | DWY20_04990 | Not Available | Positive | 1224436 - 1225077 | 24085.3 |
| lysm peptidoglycan-binding domain-containing protein | DWY20_04995 | Not Available | Positive | 1225396 - 1226304 | 34171.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DWY20_05000 | Not Available | Negative | 1226401 - 1227525 | 40886.5 |
Pathways
173 pathways
Health Effects
No health effects information available for this bacterium.

