Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lower digestive tract |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWY20_04905 | Not Available | Negative | 1190774 - 1194016 | 120457.0 |
| hybrid sensor histidine kinase/response regulator | DWY20_04910 | Not Available | Positive | 1194224 - 1198573 | 167964.0 |
| holliday junction branch migration protein ruva | DWY20_04915 | Not Available | Negative | 1198648 - 1199244 | 21376.2 |
| diaminopimelate dehydrogenase | DWY20_04920 | Not Available | Positive | 1199417 - 1200316 | 32205.8 |
| prolipoprotein diacylglyceryl transferase | DWY20_04925 | Not Available | Positive | 1200412 - 1201239 | 31762.4 |
| tonb-dependent receptor | DWY20_04930 | Not Available | Positive | 1201433 - 1204537 | 115028.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY20_04935 | Not Available | Positive | 1204564 - 1206297 | 65496.0 |
| duf4960 domain-containing protein | DWY20_04940 | Not Available | Positive | 1206328 - 1207734 | 50897.0 |
| duf4975 domain-containing protein | DWY20_04945 | Not Available | Positive | 1207834 - 1209411 | 59340.0 |
| duf4980 domain-containing protein | DWY20_04950 | Not Available | Positive | 1209422 - 1211230 | 67642.1 |
Pathways
173 pathways
Health Effects
No health effects information available for this bacterium.

