Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lower digestive tract |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWY20_00245 | Not Available | Positive | 59678 - 60985 | 47537.1 |
| 16s rrna processing protein rimm | DWY20_00250 | Not Available | Positive | 60990 - 61502 | 19743.6 |
| m23 family peptidase | DWY20_00255 | Not Available | Positive | 61513 - 62376 | 32590.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWY20_00260 | Not Available | Positive | 62379 - 63536 | 42719.9 |
| rip metalloprotease rsep | DWY20_00265 | Not Available | Positive | 63578 - 64918 | 50893.3 |
| s9 family peptidase | DWY20_00270 | Not Available | Positive | 65005 - 67434 | 93801.6 |
| uracil-dna glycosylase | DWY20_00275 | Not Available | Positive | 67462 - 68124 | 25441.4 |
| lytic transglycosylase domain-containing protein | DWY20_00280 | Not Available | Negative | 68328 - 69257 | 35564.7 |
| hypothetical protein | DWY20_00285 | Not Available | Negative | 69347 - 69817 | 17473.4 |
| duf2007 domain-containing protein | DWY20_00290 | Not Available | Negative | 69814 - 70044 | 8270.0 |
Pathways
173 pathways
Health Effects
No health effects information available for this bacterium.

