Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4214 domain-containing protein | TM1040_RS00005 | Not Available | + | 27 - 5300 | 176239.0 |
| hypothetical protein | TM1040_RS00010 | Not Available | + | 6566 - 7546 | 36213.9 |
| hypothetical protein | TM1040_RS19625 | Not Available | + | 7555 - 7755 | 7287.72 |
| hypothetical protein | TM1040_RS19630 | Not Available | + | 7780 - 8247 | 17038.5 |
| Trna-met | Not Available | Not Available | + | 8272 - 8348 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 8400 - 8514 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 8758 - 11590 | Not Available |
| Trna-ala | Not Available | Not Available | + | 12084 - 12159 | Not Available |
| Trna-ile | Not Available | Not Available | + | 12225 - 12301 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 12441 - 13902 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.