Clostridium perfringens SM101

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium perfringens SM101 is a Gram-positive, rod-shaped bacterium that thrives in anaerobic conditions, making it an obligate anaerobe. This microbe prefers a temperature range of 30-37°C, classifying it as mesophilic. C. perfringens SM101 is a heterotroph, relying on organic compounds as a source of carbon and energy for growth, which occurs primarily in oxygen-deprived environments like the intestines of humans and animals, soil, and decaying organic matter. As an obligate anaerobe, C. perfringens SM101 cannot survive in the presence of oxygen, and its metabolic processes are adapted to utilize fermentation pathways. This bacterium's ability to produce various enzymes allows it to break down proteins, sugars, and complex carbohydrates, facilitating its survival in environments where competing microorganisms might struggle. The organism is commonly associated with foodborne illnesses, particularly in improperly stored meats, as it can multiply rapidly and produce potent toxins that lead to conditions such as gas gangrene, and enterotoxemia. In addition to its pathogenic potential, C. perfringens SM101 is noteworthy for its role in industrial applications, such as waste treatment and bioremediation, where its robust enzymatic activity can assist in the breakdown of organic pollutants. This microbe also serves as a model organism in research settings, aiding scientists in understanding anaerobic metabolism and the complexities of microbial interactions in ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium perfringens
StrainSM101

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium perfringens SM101
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles - Chains
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Clostridium perfringens SM101, complete sequence.

Gene Summary

Adenine Count

1017083 bp

Thymine Count

1061825 bp

Guanine Count

395046 bp

Cytosine Count

423439 bp

Genome Length

2897393 bp

Protein-coding Genes

2562 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCPR_RS13390Not AvailablePositive1237 - 167717694.2
recombinase family proteinCPR_RS13395Not AvailablePositive2060 - 263221466.7
n-acetylmuramoyl-l-alanine amidaseCPR_RS13400Not AvailableNegative2714 - 374538609.8
sigma-70 family rna polymerase sigma factorCPR_RS13405Not AvailablePositive3983 - 454922699.4
bhla/uvib family holin-like peptideCPR_RS13410Not AvailablePositive4600 - 47977590.15
sh3 domain-containing proteinCPR_RS13415Not AvailablePositive4927 - 8097116334.0
hypothetical proteinCPR_RS13420Not AvailablePositive8113 - 840011087.2
nadar family proteinCPR_RS13425Not AvailablePositive8525 - 907621538.0
rnase h1/viroplasmin domain-containing proteinCPR_RS13430Not AvailablePositive10200 - 1053513132.8
copg family transcriptional regulatorCPR_RS13435Not AvailablePositive10874 - 1116711691.5

Displaying genes 1 – 10 of 2711 in total

Metabolites

1634 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001808corynebactinC39H42N6O18Chemical structure of corynebactinNot available
Average882.789Da
Monoisotopic882.2555585Da
BASm0001861(2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolC12H12O2Chemical structure of (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolNot available
Average188.226Da
Monoisotopic188.0837296Da

Displaying 1–10 of 1634 metabolites

Health Effects

No health effects information available for this bacterium.