Streptomyces ambofaciens ATCC 23877

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces ambofaciens
StrainATCC 23877

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces ambofaciens ATCC 23877
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Lasius niger
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces ambofaciens ATCC 23877 chromosome, complete genome.

Gene Summary

Adenine Count

1152650 bp

Thymine Count

1154165 bp

Guanine Count

2996951 bp

Cytosine Count

3000174 bp

Genome Length

8303940 bp

Protein-coding Genes

7248 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase family proteinSAM23877_RS32250Not AvailablePositive7335966 - 733666125046.3
hypothetical proteinSAM23877_RS32255Not AvailablePositive7337022 - 73372076725.88
dmt family transporterSAM23877_RS32260Not AvailablePositive7337264 - 733808827206.1
s1 family peptidaseSAM23877_RS32265Not AvailableNegative7338151 - 733951845961.0
maly/patb family proteinSAM23877_RS32270P63503Positive7339683 - 734086141506.1
ppox class f420-dependent oxidoreductaseSAM23877_RS32275Not AvailablePositive7340917 - 734130313952.9
zn-ribbon domain-containing ob-fold proteinSAM23877_RS32280Not AvailableNegative7341311 - 734172414940.9
tetr family transcriptional regulatorSAM23877_RS32285Not AvailableNegative7341875 - 734262126994.0
hypothetical proteinSAM23877_RS32290Not AvailablePositive7342752 - 734361232032.8
flavin reductase family proteinSAM23877_RS32295Not AvailablePositive7343614 - 734410217739.1

Displaying genes 6571 – 6580 of 7513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

432 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 432 metabolites

Health Effects

No health effects information available for this bacterium.