Streptomyces ambofaciens ATCC 23877

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces ambofaciens
StrainATCC 23877

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces ambofaciens ATCC 23877
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Lasius niger
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete

Gene Summary

Adenine Count

12517 bp

Thymine Count

15108 bp

Guanine Count

32991 bp

Cytosine Count

29042 bp

Genome Length

89658 bp

Protein-coding Genes

118 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
IntegraseSAM23877_RS28855Not AvailablePositive6579554 - 658120061071.9
hypothetical proteinSAM23877_RS28860Not AvailablePositive6582325 - 658271414530.3
hypothetical proteinSAM23877_RS28865Not AvailablePositive6582718 - 658330221700.1
Portal proteinSAM23877_RS28870Not AvailablePositive6583374 - 658473549585.7
Capsid maturation proteaseSAM23877_RS28875Not AvailablePositive6584732 - 658555631052.4
Terminase small subunitSAM23877_RS28880Not AvailablePositive6585823 - 658620314006.2
Terminase large subunitSAM23877_RS28885Q05219Positive6586359 - 658782253315.7
helix-turn-helix transcriptional regulatorSAM23877_RS38030Not AvailableNegative6587983 - 658895434960.2
hypothetical proteinSAM23877_RS38035Not AvailablePositive6589048 - 65892457163.6
AttlNot AvailableNot AvailablePositive6589432 - 6589443Not Available

Displaying genes 1 – 10 of 7513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.