Streptomyces ambofaciens ATCC 23877

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces ambofaciens
StrainATCC 23877

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces ambofaciens ATCC 23877
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Lasius niger
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces ambofaciens ATCC 23877

NZ_CP012382.1NZ_CP012383.1

Gene Summary

Adenine Count

1152650 bp

Thymine Count

1154165 bp

Guanine Count

2996951 bp

Cytosine Count

3000174 bp

Genome Length

8303940 bp

Protein-coding Genes

7248 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam proteinSAM23877_RS28895Not AvailableNegative6589474 - 658984112424.2
IntegraseSAM23877_RS39280Not AvailablePositive6589832 - 659136456436.1
Trna-gln;Not AvailableNot AvailablePositive6592062 - 6592134Not Available
Trna-cys;Not AvailableNot AvailablePositive6592185 - 6592257Not Available
Trna-leu;Not AvailableNot AvailablePositive6592296 - 6592369Not Available
Trna-pro;Not AvailableNot AvailablePositive6592381 - 6592452Not Available
duf4352 domain-containing proteinSAM23877_RS28925Not AvailableNegative6592641 - 659327621922.1
Gp1SAM23877_RS38045Not AvailablePositive6593457 - 65936667444.71
hypothetical proteinSAM23877_RS28930Not AvailablePositive6593669 - 65939208827.51
AttrNot AvailableNot AvailablePositive6594133 - 6594144Not Available

Displaying genes 11 – 20 of 7513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

432 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 432 metabolites

Health Effects

No health effects information available for this bacterium.