Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s24 family peptidaseSGRAN_RS04530Not AvailablePositive959004 - 95967524024.8
hypothetical proteinSGRAN_RS04535Not AvailableNegative959923 - 96022811103.4
aquaporin zSGRAN_RS04540Not AvailablePositive960446 - 96117124660.1
utp--glucose-1-phosphate uridylyltransferase galuSGRAN_RS04545Not AvailableNegative961208 - 96207131106.8
ompa family proteinSGRAN_RS04550Not AvailableNegative962125 - 96262517874.3
diguanylate cyclase domain-containing proteinSGRAN_RS04555Not AvailableNegative962642 - 96384142735.4
yfir family proteinSGRAN_RS04560Not AvailableNegative963838 - 96437118396.4
peptide-methionine (s)-s-oxide reductase msraSGRAN_RS04565Not AvailableNegative964522 - 96505819492.6
m48 family metallopeptidaseSGRAN_RS04570Not AvailableNegative965115 - 96611634916.4
cox15/ctaa family proteinSGRAN_RS04575Not AvailablePositive966472 - 96750037412.6

Displaying genes 951 – 960 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.