Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorSGRAN_RS04175Not AvailablePositive888034 - 88913139806.8
osmc family proteinSGRAN_RS04180Not AvailablePositive889176 - 88965216988.1
porphobilinogen synthaseSGRAN_RS04185Not AvailablePositive889742 - 89074035636.4
fused mfs/spermidine synthaseSGRAN_RS04190Not AvailablePositive890754 - 89300680775.4
gamma carbonic anhydrase family proteinSGRAN_RS04195Not AvailablePositive893003 - 89356019563.6
inner membrane-spanning protein ycibSGRAN_RS04200Not AvailableNegative894130 - 89479224054.1
signal recognition particle-docking protein ftsySGRAN_RS04205Not AvailableNegative894789 - 89571232513.3
radical sam proteinSGRAN_RS04210Not AvailableNegative895709 - 89702846410.7
diaminopimelate epimeraseSGRAN_RS04215Not AvailableNegative897025 - 89783128567.2
bifunctional diguanylate cyclase/phosphodiesteraseSGRAN_RS04220Not AvailableNegative897920 - 89954259075.5

Displaying genes 901 – 910 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.