Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiubiquitin domain-containing protein | SGRAN_RS00180 | Not Available | Negative | 40794 - 41207 | 15642.4 |
| helix-turn-helix domain-containing protein | SGRAN_RS00185 | Not Available | Positive | 41360 - 41722 | 13638.2 |
| imma/irre family metallo-endopeptidase | SGRAN_RS00190 | Not Available | Positive | 41722 - 42645 | 34373.5 |
| hypothetical protein | SGRAN_RS00195 | Not Available | Positive | 42649 - 42999 | 12912.5 |
| hypothetical protein | SGRAN_RS00200 | Not Available | Positive | 43042 - 43539 | 18051.2 |
| hypothetical protein | SGRAN_RS00205 | Not Available | Positive | 43571 - 44722 | 42168.7 |
| dctp deaminase | SGRAN_RS00210 | Not Available | Positive | 44715 - 45341 | 23288.0 |
| hypothetical protein | SGRAN_RS00215 | Not Available | Negative | 45419 - 45733 | 10959.1 |
| alpha/beta fold hydrolase | SGRAN_RS00220 | Not Available | Positive | 45843 - 46487 | 22168.9 |
| hypothetical protein | SGRAN_RS00225 | Not Available | Positive | 46767 - 46997 | 8532.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.