Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-binding oxidoreductaseSGRAN_RS04075Not AvailablePositive859631 - 86093246011.7
marr family winged helix-turn-helix transcriptional regulatorSGRAN_RS04080Not AvailableNegative861056 - 86152617063.8
duf885 family proteinSGRAN_RS04085Not AvailablePositive861608 - 86334764799.4
indolepyruvate oxidoreductase subunit beta family proteinSGRAN_RS04090Not AvailableNegative863487 - 86492351791.5
indolepyruvate ferredoxin oxidoreductase subunit alphaSGRAN_RS04095Not AvailableNegative864923 - 86704676235.4
cyclase family proteinSGRAN_RS04100Not AvailableNegative867054 - 86783327966.8
tetratricopeptide repeat proteinSGRAN_RS04105Not AvailableNegative867899 - 86976166928.3
amidohydrolase family proteinSGRAN_RS04110Not AvailablePositive869840 - 87124349487.1
marr family winged helix-turn-helix transcriptional regulatorSGRAN_RS04115Not AvailableNegative871469 - 87194217784.4
m24 family metallopeptidaseSGRAN_RS04120Not AvailablePositive872350 - 87367548041.7

Displaying genes 881 – 890 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.