Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3667 domain-containing proteinSGRAN_RS03975Not AvailablePositive837272 - 83839640874.8
duf1801 domain-containing proteinSGRAN_RS03980Not AvailablePositive838406 - 83881314568.4
crotonase/enoyl-coa hydratase family proteinSGRAN_RS03985Not AvailableNegative838950 - 83987333122.2
phosphoribosylaminoimidazolesuccinocarboxamide synthaseSGRAN_RS03990Not AvailablePositive840260 - 84103629375.3
pitrilysin family proteinSGRAN_RS03995Not AvailablePositive841137 - 844028103694.0
addiction module antidote proteinSGRAN_RS04000Not AvailableNegative844305 - 84473315611.1
bacterioferritinSGRAN_RS04005Not AvailableNegative844956 - 84543818585.1
bacterioferritin-associated ferredoxinSGRAN_RS04010Not AvailableNegative845541 - 8457146167.51
phosphoribosylformylglycinamidine synthase subunit pursSGRAN_RS04015Not AvailablePositive845920 - 8461508213.92
phosphoribosylformylglycinamidine synthase subunit purqSGRAN_RS04020Not AvailablePositive846178 - 84684323286.9

Displaying genes 861 – 870 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.