Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoprenylcysteine carboxylmethyltransferase family proteinSGRAN_RS03825Not AvailablePositive805618 - 80701551522.9
glutamate--cysteine ligaseSGRAN_RS03830Not AvailableNegative807123 - 80849650684.2
csha/cshb family fibrillar adhesin-related proteinSGRAN_RS03835Not AvailablePositive808615 - 81055864889.5
16s rrna (uracil(1498)-n(3))-methyltransferaseSGRAN_RS03840Not AvailableNegative810562 - 81133227518.4
tade/tadg family type iv pilus assembly proteinSGRAN_RS03845Not AvailablePositive811537 - 81351372108.5
tade/tadg family type iv pilus assembly proteinSGRAN_RS03850Not AvailablePositive813510 - 81407921271.4
tade/tadg family type iv pilus assembly proteinSGRAN_RS03855Not AvailablePositive814076 - 81475924632.8
4-hydroxybenzoate octaprenyltransferaseSGRAN_RS03860Not AvailablePositive814826 - 81573432015.6
chromosome segregation protein smcSGRAN_RS03865Not AvailableNegative815744 - 819187121723.0
thioredoxin domain-containing proteinSGRAN_RS03870Not AvailableNegative819338 - 82008426651.8

Displaying genes 831 – 840 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.