Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
voc family proteinSGRAN_RS03780Not AvailableNegative797970 - 79876727599.6
duf1428 domain-containing proteinSGRAN_RS22900Not AvailableNegative798803 - 79915613021.2
copper resistance protein copcSGRAN_RS22905Not AvailableNegative799229 - 79952511334.3
glutathione s-transferase family proteinSGRAN_RS03790Not AvailableNegative799576 - 80025025170.9
voc family proteinSGRAN_RS03795Not AvailableNegative800272 - 80070315716.7
tetr/acrr family transcriptional regulatorSGRAN_RS03800Not AvailableNegative800766 - 80140723123.7
yifb family mg chelatase-like aaa atpaseSGRAN_RS03805Not AvailablePositive801733 - 80324151905.3
stas/sec14 domain-containing proteinSGRAN_RS03810Not AvailablePositive803382 - 80375313348.2
polymer-forming cytoskeletal proteinSGRAN_RS03815Not AvailableNegative803766 - 80416413437.0
m23 family metallopeptidaseSGRAN_RS03820Not AvailableNegative804166 - 80537442586.8

Displaying genes 821 – 830 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.