Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddSGRAN_RS03730Not AvailableNegative793181 - 7933937775.75
ribonuclease p protein componentSGRAN_RS03735Not AvailableNegative793505 - 79384311940.7
50s ribosomal protein l34SGRAN_RS03740Not AvailableNegative793885 - 7940195133.5
hypothetical proteinSGRAN_RS03745Not AvailableNegative794121 - 79442911707.8
alpha/beta hydrolaseSGRAN_RS03750Not AvailableNegative794523 - 79532328152.4
srpbcc domain-containing proteinSGRAN_RS03755Not AvailableNegative795407 - 79587117053.2
glutathione s-transferase family proteinSGRAN_RS03760Not AvailableNegative795891 - 79654724756.6
hypothetical proteinSGRAN_RS03765Not AvailableNegative796544 - 79700816505.7
voc family proteinSGRAN_RS03770Not AvailableNegative797005 - 79749617644.7
glyoxalase/bleomycin resistance/extradiol dioxygenase family proteinSGRAN_RS03775Not AvailableNegative797493 - 79791815263.0

Displaying genes 811 – 820 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.