Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-export chaperone secbSGRAN_RS03685Not AvailableNegative784122 - 78463718511.7
hypothetical proteinSGRAN_RS22095Not AvailableNegative784841 - 78534118139.6
tim44/tima family putative adaptor proteinSGRAN_RS03690Not AvailablePositive785532 - 78620024176.4
murein transglycosylase aSGRAN_RS03695Not AvailablePositive786260 - 78762147562.8
smr/muts family proteinSGRAN_RS03700Not AvailablePositive787627 - 78820220335.7
succinyl-diaminopimelate desuccinylaseSGRAN_RS03705Not AvailableNegative788205 - 78933839625.7
cupin domain-containing proteinSGRAN_RS03710Not AvailablePositive789459 - 78992617006.0
glutathione s-transferase family proteinSGRAN_RS03715Not AvailableNegative789951 - 79062225151.8
ribosome biogenesis gtp-binding protein yiha/ysxcSGRAN_RS03720Not AvailableNegative790747 - 79138822939.7
membrane protein insertase yidcSGRAN_RS03725Not AvailableNegative791385 - 79313364198.2

Displaying genes 801 – 810 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.