Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS22775 | Not Available | Negative | 732476 - 732793 | 10746.5 |
| dsbc family protein | SGRAN_RS03445 | Not Available | Negative | 732990 - 733772 | 27264.6 |
| hypothetical protein | SGRAN_RS03450 | Not Available | Negative | 733759 - 734064 | 10319.4 |
| helix-turn-helix domain-containing protein | SGRAN_RS03455 | Not Available | Positive | 734315 - 734932 | 22707.3 |
| moba/mobl family protein | SGRAN_RS03460 | Not Available | Positive | 734979 - 735647 | 24978.8 |
| hypothetical protein | SGRAN_RS23115 | Not Available | Negative | 735728 - 735853 | 4310.02 |
| biotin/lipoyl-binding protein | SGRAN_RS03465 | Not Available | Negative | 735855 - 736556 | 24455.1 |
| tetr/acrr family transcriptional regulator | SGRAN_RS03470 | Not Available | Positive | 736660 - 737343 | 24382.4 |
| phospholipase a | SGRAN_RS03475 | Not Available | Positive | 737312 - 738565 | 45460.9 |
| hypothetical protein | SGRAN_RS22895 | Not Available | Positive | 738924 - 739127 | 7700.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.