Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trag n-terminal domain-containing proteinSGRAN_RS03340Not AvailableNegative711579 - 715349132828.0
conjugal transfer protein trahSGRAN_RS03345Not AvailableNegative715364 - 71678851545.4
hypothetical proteinSGRAN_RS03350Not AvailableNegative716834 - 71741821130.0
conjugal transfer protein trafSGRAN_RS03355Not AvailableNegative717415 - 71828732648.3
s26 family signal peptidaseSGRAN_RS03360Not AvailableNegative718284 - 71889522322.4
type-f conjugative transfer system pilin assembly protein trbcSGRAN_RS03365Not AvailableNegative718867 - 71974830959.3
conjugal transfer protein tranSGRAN_RS03370Not AvailableNegative719720 - 72083838957.8
hypothetical proteinSGRAN_RS03375Not AvailableNegative720835 - 72277267268.2
trau family proteinSGRAN_RS03380Not AvailableNegative723092 - 72410835897.7
hypothetical proteinSGRAN_RS03385Not AvailableNegative724105 - 72476423848.2

Displaying genes 731 – 740 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.