Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorSGRAN_RS03290Not AvailableNegative699704 - 70052829763.1
efflux transporter outer membrane subunitSGRAN_RS03295Not AvailablePositive700629 - 70203250618.1
hlyd family secretion proteinSGRAN_RS03300Not AvailablePositive702032 - 70310538174.9
ribosome-associated atpase/putative transporter rbbaSGRAN_RS03305Not AvailablePositive703069 - 705852102000.0
abc transporter permeaseSGRAN_RS03310Not AvailablePositive705854 - 70697840694.6
autoinducer binding domain-containing proteinSGRAN_RS03315Not AvailablePositive707273 - 70806429343.4
type iv toxin-antitoxin system abiei family antitoxinSGRAN_RS03320Not AvailablePositive708258 - 70904329468.5
nucleotidyl transferase abieii/abigii toxin family proteinSGRAN_RS03325Not AvailablePositive709048 - 70996834090.6
hypothetical proteinSGRAN_RS03330Not AvailableNegative710182 - 71053512976.4
hypothetical proteinSGRAN_RS03335Not AvailablePositive711133 - 71158216833.1

Displaying genes 721 – 730 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.