Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitSGRAN_RS03195Not AvailableNegative678114 - 681185108478.0
efflux rnd transporter periplasmic adaptor subunitSGRAN_RS03200Not AvailableNegative681195 - 68230737238.0
hamp domain-containing sensor histidine kinaseSGRAN_RS03205Not AvailableNegative682365 - 68338136240.2
response regulator transcription factorSGRAN_RS03210Not AvailableNegative683378 - 68405524681.7
cytochrome b/b6 domain-containing proteinSGRAN_RS03215Not AvailableNegative684134 - 68482324635.1
vit family proteinSGRAN_RS03220Not AvailableNegative684896 - 68559723922.2
hypothetical proteinSGRAN_RS03225Not AvailableNegative685791 - 6860429475.48
hypothetical proteinSGRAN_RS22890Not AvailableNegative686537 - 68733728966.6
l,d-transpeptidaseSGRAN_RS03235Not AvailableNegative687309 - 68839138371.2
hypothetical proteinSGRAN_RS22510Not AvailableNegative688402 - 6886448896.69

Displaying genes 701 – 710 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.