Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SGRAN_RS03155 | Not Available | Positive | 669512 - 670156 | 23803.3 |
| mbl fold metallo-hydrolase | SGRAN_RS03160 | Not Available | Positive | 670227 - 671147 | 33849.9 |
| sulfite exporter taue/safe family protein | SGRAN_RS03165 | Not Available | Positive | 671152 - 671940 | 26160.6 |
| class i sam-dependent methyltransferase | SGRAN_RS03170 | Not Available | Positive | 671969 - 672829 | 31191.0 |
| hypothetical protein | SGRAN_RS21480 | Not Available | Positive | 672855 - 673106 | 8876.65 |
| energy transducer tonb | SGRAN_RS21485 | Not Available | Negative | 673100 - 673816 | 25048.9 |
| tonb-dependent receptor | SGRAN_RS03175 | Not Available | Negative | 673823 - 676015 | 78301.2 |
| duf2946 family protein | SGRAN_RS03180 | Not Available | Negative | 676125 - 676523 | 14053.6 |
| tolc family protein | SGRAN_RS03185 | Not Available | Negative | 676584 - 677822 | 44584.4 |
| duf3240 family protein | SGRAN_RS03190 | Not Available | Negative | 677822 - 678121 | 10938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.