Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhodanese-like domain-containing proteinSGRAN_RS03015Not AvailablePositive641240 - 64157811612.0
efflux rnd transporter periplasmic adaptor subunitSGRAN_RS03020Not AvailablePositive641618 - 64266735664.1
efflux rnd transporter permease subunitSGRAN_RS03025Not AvailablePositive642664 - 645870114878.0
helix-turn-helix transcriptional regulatorSGRAN_RS03030Not AvailablePositive645867 - 64619011658.2
duf3365 domain-containing proteinSGRAN_RS03035Not AvailablePositive646283 - 64682519156.8
cytochrome bSGRAN_RS03040Not AvailableNegative646922 - 64747020331.3
alkylphosphonate utilization proteinSGRAN_RS03045Not AvailableNegative647567 - 64787211430.6
duf1275 family proteinSGRAN_RS03050Not AvailableNegative647901 - 64859324201.8
beta-ketothiolase bktbSGRAN_RS03055Not AvailableNegative648603 - 64979941302.6
sulp family inorganic anion transporterSGRAN_RS03060Not AvailableNegative649852 - 65152858288.3

Displaying genes 661 – 670 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.