Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional aminoglycoside phosphotransferase/atp-binding proteinSGRAN_RS02915Not AvailableNegative619606 - 62106653152.5
hsp20/alpha crystallin family proteinSGRAN_RS02920Not AvailableNegative621167 - 62166117959.0
pas domain s-box proteinSGRAN_RS02925Not AvailablePositive622201 - 62402466290.7
response regulator transcription factorSGRAN_RS02930Not AvailablePositive624014 - 62462822033.8
response regulator transcription factorSGRAN_RS02935Not AvailablePositive624691 - 62512215630.0
group ii truncated hemoglobinSGRAN_RS02940Not AvailablePositive625170 - 62558014735.6
zinc-dependent alcohol dehydrogenase family proteinSGRAN_RS02945Not AvailablePositive625612 - 62661935254.1
universal stress proteinSGRAN_RS21470Not AvailablePositive626735 - 62756829540.3
zinc-dependent alcohol dehydrogenase family proteinSGRAN_RS02955Not AvailablePositive627605 - 62864236726.4
thymidine phosphorylase family proteinSGRAN_RS02960Not AvailablePositive628693 - 63021052840.6

Displaying genes 641 – 650 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.