Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
copg family transcriptional regulatorSGRAN_RS02865Not AvailablePositive599366 - 59966511008.3
type iv secretion system dna-binding domain-containing proteinSGRAN_RS02870Not AvailablePositive599838 - 60198878676.5
mobf family relaxaseSGRAN_RS02875Not AvailablePositive601985 - 604978111075.0
restriction endonucleaseSGRAN_RS02880Not AvailablePositive605003 - 60557822029.9
lytic transglycosylase domain-containing proteinSGRAN_RS02885Not AvailablePositive605593 - 60613219877.0
phosphoenolpyruvate synthaseSGRAN_RS02890Not AvailablePositive606698 - 60907985951.1
universal stress proteinSGRAN_RS21460Not AvailablePositive609376 - 61038936406.9
gh36-type glycosyl hydrolase domain-containing proteinSGRAN_RS02900Not AvailablePositive610393 - 618804311318.0
hypothetical proteinSGRAN_RS02905Not AvailablePositive618916 - 6191528900.67
trar/dksa family transcriptional regulatorSGRAN_RS21465Not AvailablePositive619207 - 61953311657.6

Displaying genes 631 – 640 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.