Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS02725 | Not Available | Positive | 579267 - 580085 | 29045.9 |
| hypothetical protein | SGRAN_RS22075 | Not Available | Positive | 580123 - 580533 | 15043.4 |
| hypothetical protein | SGRAN_RS02735 | Not Available | Positive | 580769 - 580963 | 6684.66 |
| duf3560 domain-containing protein | SGRAN_RS02740 | Not Available | Positive | 581096 - 582577 | 54969.9 |
| hypothetical protein | SGRAN_RS22765 | Not Available | Positive | 582574 - 583092 | 18446.4 |
| hypothetical protein | SGRAN_RS02750 | Not Available | Positive | 583095 - 583535 | 16663.1 |
| atp-binding protein | SGRAN_RS02755 | Not Available | Positive | 583685 - 585385 | 62061.3 |
| duf1419 domain-containing protein | SGRAN_RS02760 | Not Available | Positive | 585460 - 586050 | 22152.4 |
| hypothetical protein | SGRAN_RS02765 | Not Available | Positive | 586094 - 586633 | 19667.1 |
| duf6283 family protein | SGRAN_RS02770 | Not Available | Positive | 586630 - 586995 | 13824.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.