Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS02675 | Not Available | Positive | 566651 - 566935 | 10310.0 |
| hypothetical protein | SGRAN_RS02680 | Not Available | Positive | 566996 - 567475 | 17863.3 |
| hypothetical protein | SGRAN_RS02685 | Not Available | Positive | 567497 - 568735 | 45116.4 |
| lactate dehydrogenase | SGRAN_RS02690 | Not Available | Positive | 568856 - 574000 | 189572.0 |
| hypothetical protein | SGRAN_RS02695 | Not Available | Positive | 574301 - 574777 | 18139.5 |
| hypothetical protein | SGRAN_RS02700 | Not Available | Positive | 575034 - 576281 | 46355.9 |
| n-6 dna methylase | SGRAN_RS02705 | Not Available | Positive | 576449 - 577258 | 29854.0 |
| hypothetical protein | SGRAN_RS02710 | Not Available | Positive | 577396 - 578091 | 25887.2 |
| hypothetical protein | SGRAN_RS02715 | Not Available | Positive | 578166 - 578813 | 23517.3 |
| hypothetical protein | SGRAN_RS02720 | Not Available | Positive | 578825 - 579286 | 16828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.