Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | SGRAN_RS02625 | Not Available | Positive | 558920 - 559267 | 12947.6 |
| toprim domain-containing protein | SGRAN_RS02630 | Not Available | Positive | 559451 - 560431 | 35570.8 |
| prtrc system parb family protein | SGRAN_RS02635 | Not Available | Positive | 560468 - 562117 | 60193.7 |
| prtrc system protein e | SGRAN_RS02640 | Not Available | Positive | 562155 - 562592 | 14873.7 |
| prtrc system protein c | SGRAN_RS02645 | Not Available | Positive | 562642 - 562848 | 7404.75 |
| hypothetical protein | SGRAN_RS02650 | Not Available | Positive | 562927 - 564018 | 40414.8 |
| prtrc system protein b | SGRAN_RS02655 | Not Available | Positive | 564030 - 564860 | 30283.3 |
| prtrc system protein a | SGRAN_RS02660 | Not Available | Positive | 564857 - 565516 | 23409.0 |
| prtrc system thif family protein | SGRAN_RS02665 | Not Available | Positive | 565506 - 566264 | 26941.1 |
| hypothetical protein | SGRAN_RS02670 | Not Available | Positive | 566379 - 566654 | 9696.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.