Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dienelactone hydrolase family proteinSGRAN_RS02475Not AvailablePositive527345 - 52808526301.1
alpha/beta fold hydrolaseSGRAN_RS02480Not AvailablePositive528118 - 52898131262.0
multidrug efflux smr transporterSGRAN_RS02485Not AvailableNegative529264 - 52959011423.6
hypothetical proteinSGRAN_RS02490Not AvailableNegative529684 - 53064936067.2
acyl-coa carboxylase subunit betaSGRAN_RS02495Not AvailableNegative530705 - 53231558132.7
biotin/lipoyl-containing proteinSGRAN_RS02500Not AvailableNegative532315 - 53281817848.1
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaSGRAN_RS02505Not AvailableNegative532806 - 53428151950.1
amp-binding proteinSGRAN_RS02510Not AvailableNegative534278 - 53581056117.8
enoyl-coa hydratase/isomerase family proteinSGRAN_RS02515Not AvailableNegative535935 - 53668726730.4
acetyl-coa c-acetyltransferaseSGRAN_RS02520Not AvailableNegative536702 - 53787440896.9

Displaying genes 551 – 560 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.